cardiovascular_lipid · nmr_metabolomics

HDL cholesterol (NMR)

Valid comparisons for this clinically grounded task are grouped by fixed information set.

Per-track results

Benchmark Tracks

hdl_nmr/694434b8b8a7

Scored split: test. Primary metric: r2 (higher is better).

#	Predictor	Method	Absolute test R²	Test n
1	CGM Iglu	TabPFN v2	0.2548	1400
2	CGM Iglu	TabDPT	0.2541	1400
3	CGM Iglu	TabICL	0.254	1400
4	CGM Iglu	TabPFN 3.5	0.2537	1400
5	CGM Iglu	TabFM	0.2508	1400
6	CGM Iglu	TabSwift	0.2467	1400
7	CGM Iglu	RealMLP	0.2452	1400
8	CGM Iglu	Gradient-boosted trees	0.2318	1400
9	CGM Iglu	Ridge	0.2289	1400

hdl_nmr/6d75097a2a0f

Scored split: test. Primary metric: r2 (higher is better).

#	Predictor	Method	Absolute test R²	Test n
1	HPP Curated Panel	TabSwift	0.2414	289
2	HPP Curated Panel	TabPFN v2	0.2403	289
3	HPP Curated Panel	TabDPT	0.2387	289
4	HPP Curated Panel	Gradient-boosted trees	0.2354	289
5	HPP Curated Panel	RealMLP	0.2344	289
6	HPP Curated Panel	TabPFN 3.5	0.2331	289
7	HPP Curated Panel	TabFM	0.2315	289
8	HPP Curated Panel	TabICL	0.231	289
9	HPP Curated Panel	Ridge	0.2039	289

hdl_nmr/7bea51210023

Scored split: test. Primary metric: r2 (higher is better).

#	Predictor	Method	Absolute test R²	Test n
1	CGM Iglu	TabICL	0.1558	528
2	CGM Iglu	TabFM	0.1527	528
3	CGM Iglu	TabPFN v2	0.1523	528
4	CGM Iglu	TabDPT	0.1519	528
5	CGM Iglu	TabPFN 3.5	0.1511	528
6	CGM Iglu	TabSwift	0.147	528
7	CGM Iglu	Ridge	0.1408	528
8	CGM Iglu	RealMLP	0.1381	528
9	CGM Iglu	Gradient-boosted trees	0.1326	528

hdl_nmr/8faa5e85e487

Scored split: test. Primary metric: r2 (higher is better).

#	Predictor	Method	Absolute test R²	Test n
1	HPP Curated Panel	TabDPT	0.2727	1006
2	HPP Curated Panel	TabFM	0.272	1006
3	HPP Curated Panel	TabICL	0.2719	1006
4	HPP Curated Panel	TabPFN v2	0.2713	1006
5	HPP Curated Panel	TabSwift	0.2698	1006
6	HPP Curated Panel	TabPFN 3.5	0.2694	1006
7	HPP Curated Panel	RealMLP	0.262	1006
8	HPP Curated Panel	Gradient-boosted trees	0.2509	1006
9	HPP Curated Panel	Ridge	0.2472	1006